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›› 2015, Vol. 37 ›› Issue (1): 50-53.

• 论文与报告 • 上一篇    下一篇

刺激隐核虫PCR检测方法的建立

张新艳,樊海平,林煜,吴斌   

  1. 福建省淡水水产研究所
  • 收稿日期:2014-10-13 修回日期:2014-11-21 出版日期:2015-02-25 发布日期:2015-03-04
  • 通讯作者: 樊海平

Establishment of PCR amplification detection for Cryptocaryon irritans

  • Received:2014-10-13 Revised:2014-11-21 Online:2015-02-25 Published:2015-03-04

摘要: 根据已知刺激隐核虫ITS序列设计引物,扩增刺激隐核虫ITS部分序列,并进行克隆、测序及序列分析建立刺激隐核虫PCR快速检测方法,检测DNA 片段长度为387 bp ,与福建长乐CL1209 (KC550300)、福建福鼎FD1210 ( KC550302) 、广东番禺PYH4.12 株(DQ27 0010) 、日本Wakayama 分离株(AB608054 )、台湾嘉义Chiayi株(A F490381 ) 等序列同源性为100 % ,检测灵敏度为2个虫体。应用建立方法对2011 - 2013年收集到的50份患刺激隐核虫病的大黄鱼样品进行检测,結果与根据临床检测結果的符合率为100% 。该检测方法的建立,为刺激隐核虫病的监测和诊断奠定了快速、简便、高通量的检测方法基础。

关键词: 刺激隐核虫, PCR检测, ITS, Cryptocaryon irritans, PCR detection, internal transcribed spacer

Abstract: Specific primers were designed based on the DNA sequence of internal transcribed spacer 1 (ITS-1). The genomic DNA of Cryptocaryon irritans,isolated from culturing Pseudosciaena crocea in Luoyuan of Fujian,used as a template DNA to amplify part of the gene fragment of ITS-1,which had a 387 bp band when electrophoresed on an agarose gel. Then the PCR amplification products were cloned,sequenced and analyzed. Homology comparison indicated that they shared 100 % identity with the gene sequence of CL1209 strain ( KC550300),FD 1210 ( KC550302) , PYH 4.12 strain ( DQ270010) ,Wakayama strain (AB608054), and Chiayi strain (AF490381) . PCR amplification for the detection of Cryptocaryon irritans was established, which was limited to 2 polypides, then being applied to detect the samples of the C. irritans monitoring during the last three years (2011-2013 ) . The results were 100% conformed to clinical test results. It revealed that this PCR amplification method was quick,sensitive reproducible and applicable for the detection of Cryptocaryon irritans.