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渔业研究 ›› 2022, Vol. 44 ›› Issue (2): 154-161.DOI: 10.14012/j.cnki.fjsc.2022.02.006

• 论文与报告 • 上一篇    下一篇

罗湖病毒(TiLV)RT-qPCR方法的建立

徐淑菲1,朱黄鑫2,曾韵颖2,刘启霖2方成俊2林双庆1孔凡德1*   

  1. 1. 厦门海关技术中心,福建 厦门361026
    2. 东山海关综合技术服务中心,福建 漳州363401
  • 收稿日期:2021-10-13 修回日期:2021-11-11 出版日期:2022-04-25 发布日期:2022-04-25
  • 通讯作者: 孔凡德(1967-),男,研究员,博士,从事动物及动物产品检疫. E-mail:kfd67@sina.com
  • 作者简介:徐淑菲(1978-),女,高级兽医师,硕士,从事动物及动物产品检疫. E-mail:xusf6050@163.com
  • 基金资助:
    福建省引导性项目(2019N0030)

Establishment of reverse transcription-quantitative real-time PCR(RT-qPCR) for detection of tilapia lake virus

  • Received:2021-10-13 Revised:2021-11-11 Online:2022-04-25 Published:2022-04-25
  • Contact: Shu-Fei XU

摘要: 研究根据罗湖病毒(Tilapia lake virus,TiLV)编码RNA聚合酶的基因片段1设计1对特异性引物和探针,建立一种检测TiLV的实时荧光定量RT-PCR(RT-qPCR)方法,并对该检测方法进行了反应体系和条件优化。结果表明,优化的20 μL反应体系: 2×Probe RT-PCR Master Mix 10 μL,QN Probe RT-Mix 0.2 μL,5 μmol/L的引物TiLV-qF、TiLV-qR、探针TiLV-qP各1 μL,模板1 μL,补充RNase-free water至20 μL。优化的反应条件:反转录45℃ 20 min;预变性95℃ 5 min;扩增95℃ 15 s,60℃ 1 min,40个循环。荧光收集设置在60℃退火延伸时进行。本文建立的RT-qPCR方法检测TiLV的特异性好,重复性好,灵敏度高,灵敏度为2.5×10-8 ng/μL,可为TiLV的监测和预防提供技术支撑。

关键词: 罗湖病毒(TiLV), 特异性引物, 探针, 实时荧光定量RT-PCR(RT-qPCR)

Abstract: To establish a fluorescent RT-PCR method for the detection of tilapia lake virus (TiLV), according to the segment 1 codified for the RNA polymerase enzyme, a pair of specific primers and probe was designed and a reverse transcription-quantitative real-time PCR (RT-qPCR) method was established. The reaction system and conditions were optimized. The results showed that the optimized 20 μL reaction system contained 10 μL 2×Probe RT-PCR Master Mix, 0.2 μL QN Probe RT-Mix, 5 μmol/L of all 1 μL primer TiLV-qF, TiLV-qR and probe TiLV-qP of working concentration, 1 μL template, and RNase-free water was added to 20 μL. The optimized reaction conditions were as follows: reverse transcription 45℃ for 20 min; Pre-denaturation at 95℃ for 5 min; 40 cycles of amplification were performed at 95℃ for 15 s and 60℃ for 1 min. Fluorescence collection was set at 60℃ for annealing extension. The RT-qPCR method of TiLV was superior in specificity, repeatability and sensitivity. The sensitivity value was 2.5×10-8 ng/μL. It provided technical support for monitoring and prevention of TiLV.

Key words: tilapia lake virus(TiLV), specific primer, probe, reverse transcription-fluorogenic quantitative PCR

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