Abstract: Aquaculture industry is an important part of Chinese fishery. Aquaculture in successive years suffered natural disasters in Fujian province in recent years, the effect of infrastructure severely damage, not only causeing huge economic losses, but also directly influencing the sustainable development of fishery economy. Based on the geographical and climate features of Fujian, in view of main aquaculture natural disasters, such as the typhoons, floods, cold wave, red tides and epidemic in Fujian province, this paper put forward some technology main points for the preventive measures against natural disasters and aquaculture production recovery after disaster, so as to provide reference for aquaculture practitioners, then to prevent aquaculture natural disasters, which would be beneficial to reduce economic loss.